Information
Accession GMS-64-13 

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TitleHi-C on activated B cells
Submit date2025-01-26 19:17:17
Last update date2025-01-26 19:17:17
Contact Sung-Joon PARK
park AT hgc.jp
The University of Tokyo
Sharing
Total file size6.36 GB
Keywords Hi-C  4DN  contact matrix 
 Study
Experiment type in situ Hi-C
Summary 4DNFIXSTDPHL
Assay Details: MboI
Dataset: Hi-C on activated B cells
Condition: no replication
Notes: N/A
Biosource: B cell derived cell line
File Download URL: https://data.4dnucleome.org/files-processed/4DNFIXSTDPHL/@@download/4DNFIXSTDPHL.hic

4DNFIWBUHQD1
Assay Details: MboI
Dataset: Hi-C on activated B cells
Condition: no replication
Notes: N/A
Biosource: B cell derived cell line
File Download URL: https://data.4dnucleome.org/files-processed/4DNFIWBUHQD1/@@download/4DNFIWBUHQD1.hic

Citation(s) 4DNES3O1B45O
 Experiment
OrganismHuman
Cell (Tissue) B cell derived cell line
Protocol 4DN_in_situ_Hi-C_protocol_20170729.pdf
Data processing HiC Processing Pipeline - v0.3.0
 Analysis
[572] 4DNFIWBUHQD1: no replication
 JuiceBox  Domain CallingBrowse  Browse (All)
Human (hg38); Hi-C

HiC

4DNFIWBUHQD1.hic (3.09 GB)  
 mCool
 Cooler-Tree


PHi-C2 (polymer dynamics modeling)








































[571] 4DNFIXSTDPHL: no replication
 JuiceBox  Domain CallingBrowse
Human (hg38); Hi-C

HiC

4DNFIXSTDPHL.hic (3.27 GB)  
 mCool
 Cooler-Tree


PHi-C2 (polymer dynamics modeling)








































 Supplements
[572] 4DNFIWBUHQD1.hic
 4DNFIWBUHQD1: no replication
 application/octet-stream 3.09 GB MD5: 108110000ef8cb5a2322f4ffdf06b6b3
[571] 4DNFIXSTDPHL.hic
 4DNFIXSTDPHL: no replication
 application/octet-stream 3.27 GB MD5: c6a3449755822cd05a4ebcb3e837e2ae