Genome Modality Suite

Accelerating progress toward
the understanding of multi-dimensional genome properties

 DB Status: OK

4 jobs

  • Database

    Accessing and exploring GMS data

    Genome Browser

    Browsing multi-modal genome data

    Protein Viewer

    Interactive visualizing multiple 3D proteins

    Single-cell Browser

    Interactive single-cell data browsing

    Account

    Signing up in order to use Genome Modality Suite

    1.09

    TB files

    Records

    Tissues/Cells

    Users

    Latest Records
    GMS-64-85 (2025-04-22 13:59:21)
    Airspace Macrophages and Monocytes Exist in Transc... 1.14 GB

    GMS-65-113 (2025-04-10 09:49:35)
    Intra-chromosomal Hi-C contacts in mESC 3.47 GB

    GMS-64-84 (2025-04-09 11:35:38)
    Single-cell transcriptome of hiPSC-derived lacrima... 2.57 GB

    GMS-65-112 (2025-04-01 18:26:35)
    A common molecular mechanism underlying Cornelia d... 2.40 GB

    GMS-64-83 (2025-03-31 10:08:36)
    Transcriptome and germ-cell development 44.48 GB

    [more...]


    What's New
    •   Single-cell Cell Browser is now available.  (2025/04/20)
    •   Transcriptome during mouse germ-cell development is available. GMS-64-82 and GMS-64-83 (2025/03/31)
      Searchable for genes related to PGC & Spermatogenesis
    •   PDB and mmCIF are uploadable. GMS-64-1 (2025/03/24)
    •   Motif enrichment analysis within boundaries and anchors is now available (2024/12/14)
    •   4DN domain calling is now available (2024/11/14)
    •   deepTools (ver. 3.5.4) has been installed (2024/11/01)
    •   HicExplorer (ver. 3.7.5) has been installed (2024/10/25)
    •   Domain calling with hic data is now available
      ArrowHead, Diamond-insulation,
      hicDetectLoops, HicCups&APA
       (2023/12/29)
    •   set --accept .mcool
       (automatically converted into .hic) …
       (2023/12/23)
    •   set --accept .bedGraph.gz … (2023/11/10)
    •   set --install EPI (ABC model)… (2023/02/02)
    •   set --update JBrowse2 … (2023/01/12)
    •   set --create Introduction Movie… (2023/01/10)
    •   set --update PHi-C2 … (2022/04/10)
    •   set --install JuiceBox … (2022/02/18)
    •   set --install JBrowse2 … (2021/11/12)
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