Information
Accession GMS-64-84 

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TitleSingle-cell transcriptome of hiPSC-derived lacrimal gland organoids
Submit date2025-04-09 11:35:38
Last update date2025-04-22 13:21:05
Contact Sung-Joon PARK
park AT hgc.jp
The University of Tokyo
Sharing
Total file size2.57 GB
Keywords Nuclear-scale Single cell 
 Study
Experiment type Single-cell RNA sequencing
Summary
Citation(s) https://pubmed.ncbi.nlm.nih.gov/35444274/
 Experiment
OrganismHuman
Cell (Tissue) Larcrimal gland
Protocol
Data processing Library preparation was performed using the 10x Genomics Chromium.
Sequencing was performed at Macrogen Japan using the Truseq library preparation kit and NovaSeq 6000 system.
Cell Ranger and the DropletUtils package of Bioconductor were used for mapping and filtering the 10x data.
 Analysis
[793] scRNA from LG-like organoids (Day 0)

R
LG62-day0_SR3_4.RData (395.91 MB)  
[792] scRNA from LG-like organoids (Day 20)

R
LG62-day20_SR3_4.RData (203.97 MB)  
[787] scRNA from LG-like organoids (Day 10)

R
LG_d10Seurat5.rds (204.33 MB)  
[786] scRNA from LG-like organoids (Day 0,10,20)

R
S3_LG.RData (1.77 GB)  
 Supplements [download all]
[793] LG62-day0_SR3_4.RData
 scRNA from LG-like organoids (Day 0)
 application/octet-stream 395.91 MB MD5: e1513154f5f5341b9d22c1c17b60136e
[792] LG62-day20_SR3_4.RData
 scRNA from LG-like organoids (Day 20)
 application/octet-stream 203.97 MB MD5: 4f280c4c36f3a02558d988eb3d430a1f
[787] LG_d10Seurat5.rds
 scRNA from LG-like organoids (Day 10)
 application/octet-stream 204.33 MB MD5: f04ddfda374feb2b10c713b874ce60af
[786] S3_LG.RData
 scRNA from LG-like organoids (Day 0,10,20)
 application/octet-stream 1.77 GB MD5: 661ed3cd07e3977aab88023569dcf31b