Information
Accession GMS-65-113 

URL copied to the clipboard

TitleIntra-chromosomal Hi-C contacts in mESC
Submit date2025-04-10 09:49:35
Last update date2025-04-10 09:46:16
Contact GMSuite GENOMEMODALITY
gmsuite AT hgc.jp
The University of Tokyo
Sharing
Total file size3.47 GB
Keywords  
 Study
Experiment type Hi-C experiment with mouse ESCs.
PHi-C structure modeling.
Summary
Citation(s)
 Experiment
OrganismMouse
Cell (Tissue) embryonic stem cell
Protocol
Data processing HiCExplorer 3.7.5
 Analysis
[765] Intra-chromosomal Hi-C contacts (Rep1)
 JuiceBoxBrowse  Browse (All)
Mouse (mm10); Hi-C

HiC

Merge1.intra.MQ30.ValidPairs.hic (1.69 GB)  
 mCool
 Cooler-Tree


PHi-C2 (polymer dynamics modeling)
Browse


[766] Intra-chromosomal Hi-C contacts (Rep 2)
 JuiceBox  Domain CallingBrowse
Mouse (mm10); Hi-C

HiC

Merge2.intra.MQ30.ValidPairs.hic (1.79 GB)  
 mCool
 Cooler-Tree


PHi-C2 (polymer dynamics modeling)
Browse








































 Supplements [download all]
[765] Merge1.intra.MQ30.ValidPairs.hic
 Intra-chromosomal Hi-C contacts (Rep1)
 application/octet-stream 1.69 GB MD5: 1c07ac5d23e49a94a82fdd46e7547738
[766] Merge2.intra.MQ30.ValidPairs.hic
 Intra-chromosomal Hi-C contacts (Rep 2)
 application/octet-stream 1.79 GB MD5: 3e005b4c56a290f969cfbda06e300e76