Information
Accession GMS-64-17 

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TitleHi-C on HAP-1 +/- WAPL or SCC4 KO
Submit date2025-01-31 10:15:47
Last update date2025-01-31 10:15:47
Contact Sung-Joon PARK
park AT hgc.jp
The University of Tokyo
Sharing
Total file size6.94 GB
Keywords Hi-C  4DN  contact matrix 
 Study
Experiment type in situ Hi-C
Summary 4DNFIK61ILGM
Assay Details: MboI
Dataset: Hi-C on HAP-1 +/- WAPL or SCC4 KO
Condition: WT
Notes: N/A
Biosource: HAP-1
File Download URL: https://data.4dnucleome.org/files-processed/4DNFIK61ILGM/@@download/4DNFIK61ILGM.hic

4DNFIO6M7YK8
Assay Details: MboI
Dataset: Hi-C on HAP-1 +/- WAPL or SCC4 KO
Condition: WT
Notes: N/A
Biosource: HAP-1
File Download URL: https://data.4dnucleome.org/files-processed/4DNFIO6M7YK8/@@download/4DNFIO6M7YK8.hic
Citation(s) 4DNESIU6F8HF
 Experiment
OrganismHuman
Cell (Tissue) HAP-1
Protocol 4DN_in_situ_Hi-C_protocol_20170729.pdf
Data processing HiC Processing Pipeline - v0.3.0
 Analysis
[578] 4DNFIK61ILGM: WT
 JuiceBox    Domain Calling   Browse  Browse (All)
Human (hg38); Hi-C
 		 
HiC
4DNFIK61ILGM.hic (3.46 GB)  
 mCool
 Cooler-Tree


PHi-C2 (polymer dynamics modeling)
[579] 4DNFIO6M7YK8: WT
 JuiceBox    Domain Calling   Browse 
Human (hg38); Hi-C
 		 
HiC
4DNFIO6M7YK8.hic (3.48 GB)  
 mCool
 Cooler-Tree


PHi-C2 (polymer dynamics modeling)
 Supplements
[578] 4DNFIK61ILGM.hic 
 4DNFIK61ILGM: WT
 application/octet-stream 3.46 GB MD5: e97810157d735c7f931852e4f23fffb2
[579] 4DNFIO6M7YK8.hic 
 4DNFIO6M7YK8: WT
 application/octet-stream 3.48 GB MD5: 07cd533c5aaa9de5bade082e393667c7