Information
Accession GMS-64-18 

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TitleHi-C on HAP-1 +/- WAPL or SCC4 KO
Submit date2025-01-31 10:26:19
Last update date2025-01-31 10:26:19
Contact Sung-Joon PARK
park AT hgc.jp
The University of Tokyo
Sharing
Total file size6.75 GB
Keywords Hi-C  4DN  contact matrix 
 Study
Experiment type in situ Hi-C
Summary 4DNFIYD8LO9Z
Assay Details: MboI
Dataset: Hi-C on HAP-1 +/- WAPL or SCC4 KO
Condition: WAPL SCC4 Double knock out
Notes: N/A
Biosource: HAP-1
File Download URL: https://data.4dnucleome.org/files-processed/4DNFIYD8LO9Z/@@download/4DNFIYD8LO9Z.hic

4DNFI1CJV7RG
Assay Details: MboI
Dataset: Hi-C on HAP-1 +/- WAPL or SCC4 KO
Condition: WAPL SCC4 Double knock out
Notes: N/A
Biosource: HAP-1
File Download URL: https://data.4dnucleome.org/files-processed/4DNFI1CJV7RG/@@download/4DNFI1CJV7RG.hic

Citation(s) 4DNESSQU7B76
 Experiment
OrganismHuman
Cell (Tissue) HAP-1
Protocol 4DN_in_situ_Hi-C_protocol_20170729.pdf
Data processing HiC Processing Pipeline - v0.3.0
 Analysis
[581] 4DNFI1CJV7RG: WAPL SCC4 Double knock out
 JuiceBox  Domain CallingBrowse  Browse (All)
Human (hg38); Hi-C

HiC

4DNFI1CJV7RG.hic (3.38 GB)  
 mCool
 Cooler-Tree


PHi-C2 (polymer dynamics modeling)














































[580] 4DNFIYD8LO9Z: WAPL SCC4 Double knock out
 JuiceBox  Domain CallingBrowse
Human (hg38); Hi-C

HiC

4DNFIYD8LO9Z.hic (3.37 GB)  
 mCool
 Cooler-Tree


PHi-C2 (polymer dynamics modeling)














































 Supplements
[581] 4DNFI1CJV7RG.hic
 4DNFI1CJV7RG: WAPL SCC4 Double knock out
 application/octet-stream 3.38 GB MD5: 19d00099b720a71604cc6ee94252f915
[580] 4DNFIYD8LO9Z.hic
 4DNFIYD8LO9Z: WAPL SCC4 Double knock out
 application/octet-stream 3.37 GB MD5: 009d2f9a6ff750d489e34db1de58121a