Information
Accession GMS-64-30 

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TitleHi-C on RAD21-AID tagged HCT-116
Submit date2025-02-04 14:11:14
Last update date2025-02-04 14:11:14
Contact Sung-Joon PARK
park AT hgc.jp
The University of Tokyo
Sharing
Total file size5.45 GB
Keywords Hi-C  4DN  contact matrix 
 Study
Experiment type in situ Hi-C
Summary 4DNFI7XAZNNQ
Assay Details: MboI
Dataset: Hi-C on RAD21-AID tagged HCT-116
Condition: 6h auxin treatment and 180 min withdrawal
Notes: N/A
Biosource: HCT116 with Crispr generated mClover and AID-tagged RAD21
File Download URL: https://data.4dnucleome.org/files-processed/4DNFI7XAZNNQ/@@download/4DNFI7XAZNNQ.hic

Citation(s) 4DNESOGIV7NG
 Experiment
OrganismHuman
Cell (Tissue) HCT116
Protocol 4DN_in_situ_Hi-C_protocol_20170729.pdf
Data processing HiC Processing Pipeline - v0.3.0
 Analysis
[597] 4DNFI7XAZNNQ: 6h auxin treatment and 180 min withdrawal
 JuiceBox  Domain CallingBrowse  Browse (All)
Human (hg38); Hi-C

HiC

4DNFI7XAZNNQ.hic (5.45 GB)  
 mCool
 Cooler-Tree


PHi-C2 (polymer dynamics modeling)














































 Supplements
[597] 4DNFI7XAZNNQ.hic
 4DNFI7XAZNNQ: 6h auxin treatment and 180 min withdrawal
 application/octet-stream 5.45 GB MD5: d14ea8071d81af5afa1ff9c742566321