Information
Accession GMS-64-34 

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TitleHi-C on HFF cells - protocol variations
Submit date2025-02-06 10:50:15
Last update date2025-02-06 10:50:15
Contact Sung-Joon PARK
park AT hgc.jp
The University of Tokyo
Sharing
Total file size1.37 GB
Keywords Hi-C  4DN  contact matrix 
 Study
Experiment type in situ Hi-C
Summary 4DNFI3CFMRID
Assay Details: HindIII
Dataset: Hi-C on HFF cells - protocol variations
Condition: Formaldehyde+DSG, HindIII
Notes: N/A
Biosource: HFF-hTERT
File Download URL: https://data.4dnucleome.org/files-processed/4DNFI3CFMRID/@@download/4DNFI3CFMRID.hic

Citation(s) 4DNESHQDSZZK
 Experiment
OrganismHuman
Cell (Tissue) HFF-hTERT
Protocol 4DN_in_situ_Hi-C_protocol_20170729.pdf
Data processing HiC Processing Pipeline - v0.3.0
 Analysis
[601] 4DNFI3CFMRID: Formaldehyde+DSG, HindIII
 JuiceBox  Domain CallingBrowse  Browse (All)
Human (hg38); Hi-C

HiC

4DNFI3CFMRID.hic (1.37 GB)  
 Hi-C map is too sparse
 mCool
 Cooler-Tree
 Supplements
[601] 4DNFI3CFMRID.hic
 4DNFI3CFMRID: Formaldehyde+DSG, HindIII
 application/octet-stream 1.37 GB MD5: 6da6f0b83949520aa845f54f8916ca98