Information
Accession GMS-64-37 

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TitleHi-C on HFF cells - protocol variations
Submit date2025-02-06 10:51:07
Last update date2025-02-06 10:51:07
Contact Sung-Joon PARK
park AT hgc.jp
The University of Tokyo
Sharing
Total file size2.57 GB
Keywords Hi-C  4DN  contact matrix 
 Study
Experiment type in situ Hi-C
Summary 4DNFI6CWNUFL
Assay Details: MboI
Dataset: Hi-C on HFF cells - protocol variations
Condition: Enzyme MboI - in situ Hi-C on HFF cells grown on beads
Notes: N/A
Biosource: HFF-hTERT
File Download URL: https://data.4dnucleome.org/files-processed/4DNFI6CWNUFL/@@download/4DNFI6CWNUFL.hic

Citation(s) 4DNESAPF27TG
 Experiment
OrganismHuman
Cell (Tissue) HFF-hTERT
Protocol 4DN_in_situ_Hi-C_protocol_20170729.pdf
Data processing HiC Processing Pipeline - v0.3.0
 Analysis
[604] 4DNFI6CWNUFL: Enzyme MboI - in situ Hi-C on HFF cells grown on beads
 JuiceBox  Domain CallingBrowse  Browse (All)
Human (hg38); Hi-C

HiC

4DNFI6CWNUFL.hic (2.57 GB)  
 Hi-C map is too sparse
 mCool
 Cooler-Tree
 Supplements
[604] 4DNFI6CWNUFL.hic
 4DNFI6CWNUFL: Enzyme MboI - in situ Hi-C on HFF cells grown on beads
 application/octet-stream 2.57 GB MD5: e51a2b7a671fef0ae6e65cdf80dd88dd