Information
Accession GMS-64-43 

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TitleHi-C on HFF cells - protocol variations
Submit date2025-02-06 10:52:09
Last update date2025-02-06 10:52:09
Contact Sung-Joon PARK
park AT hgc.jp
The University of Tokyo
Sharing
Total file size2.32 GB
Keywords Hi-C  4DN  contact matrix 
 Study
Experiment type in situ Hi-C
Summary 4DNFISPUVQHA
Assay Details: NcoI
Dataset: Hi-C on HFF cells - protocol variations
Condition: Enzyme NcoI - in situ Hi-C on HFF-hTERT cells grown on beads
Notes: N/A
Biosource: HFF-hTERT
File Download URL: https://data.4dnucleome.org/files-processed/4DNFISPUVQHA/@@download/4DNFISPUVQHA.hic

Citation(s) 4DNESY859VLG
 Experiment
OrganismHuman
Cell (Tissue) HFF-hTERT
Protocol 4DN_in_situ_Hi-C_protocol_20170729.pdf
Data processing HiC Processing Pipeline - v0.3.0
 Analysis
[610] 4DNFISPUVQHA: Enzyme NcoI - in situ Hi-C on HFF-hTERT cells grown on beads
 JuiceBox  Domain CallingBrowse  Browse (All)
Human (hg38); Hi-C

HiC

4DNFISPUVQHA.hic (2.32 GB)  
 Hi-C map is too sparse
 mCool
 Cooler-Tree
 Supplements
[610] 4DNFISPUVQHA.hic
 4DNFISPUVQHA: Enzyme NcoI - in situ Hi-C on HFF-hTERT cells grown on beads
 application/octet-stream 2.32 GB MD5: 6df992bd26a3a1cf7ab31067f02c56ff