Information
Accession GMS-64-46 

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TitleHi-C on HFF cells - protocol variations
Submit date2025-02-06 10:52:50
Last update date2025-02-06 10:52:50
Contact Sung-Joon PARK
park AT hgc.jp
The University of Tokyo
Sharing
Total file size3.35 GB
Keywords Hi-C  4DN  contact matrix 
 Study
Experiment type in situ Hi-C
Summary 4DNFIZ4F74QR
Assay Details: DpnII
Dataset: Hi-C on HFF cells - protocol variations
Condition: Enzyme DpnII - in situ Hi-C on HFF cells grown on beads
Notes: N/A
Biosource: HFF-hTERT
File Download URL: https://data.4dnucleome.org/files-processed/4DNFIZ4F74QR/@@download/4DNFIZ4F74QR.hic

Citation(s) 4DNESVUMGLG2
 Experiment
OrganismHuman
Cell (Tissue) HFF-hTERT
Protocol 4DN_in_situ_Hi-C_protocol_20170729.pdf
Data processing HiC Processing Pipeline - v0.3.0
 Analysis
[612] 4DNFIZ4F74QR: Enzyme DpnII - in situ Hi-C on HFF cells grown on beads
 JuiceBox  Domain CallingBrowse  Browse (All)
Human (hg38); Hi-C

HiC

4DNFIZ4F74QR.hic (3.35 GB)  
 mCool
 Cooler-Tree


PHi-C2 (polymer dynamics modeling)
















































 Supplements
[612] 4DNFIZ4F74QR.hic
 4DNFIZ4F74QR: Enzyme DpnII - in situ Hi-C on HFF cells grown on beads
 application/octet-stream 3.35 GB MD5: a5ee8a5ac91f453e66955a0054ca5466