Information
Accession GMS-64-48 

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TitleHi-C on CH12 +/- CTCF ZF domain
Submit date2025-02-07 19:31:29
Last update date2025-02-07 19:31:29
Contact Sung-Joon PARK
park AT hgc.jp
The University of Tokyo
Sharing
Total file size13.14 GB
Keywords Hi-C  4DN  contact matrix 
 Study
Experiment type in situ Hi-C
Summary 4DNFIC8MIJN3
Assay Details: MboI
Dataset: Hi-C on CH12 +/- CTCF ZF domain
Condition: WT
Notes: N/A
Biosource: CH12
File Download URL: https://data.4dnucleome.org/files-processed/4DNFIC8MIJN3/@@download/4DNFIC8MIJN3.hic

4DNFIV8MLWJB
Assay Details: MboI
Dataset: Hi-C on CH12 +/- CTCF ZF domain
Condition: WT
Notes: N/A
Biosource: CH12
File Download URL: https://data.4dnucleome.org/files-processed/4DNFIV8MLWJB/@@download/4DNFIV8MLWJB.hic
Citation(s) 4DNES7C6LBWI
 Experiment
OrganismHuman
Cell (Tissue) CH12
Protocol 4DN_in_situ_Hi-C_protocol_20170729.pdf
Data processing HiC Processing Pipeline - v0.3.0
 Analysis
[616] 4DNFIC8MIJN3: WT
 JuiceBox    Domain Calling   Browse  Browse (All)
Human (hg38); Hi-C
 		 
HiC
4DNFIC8MIJN3.hic (6.37 GB)  
 mCool
 Cooler-Tree


PHi-C2 (polymer dynamics modeling)
[617] 4DNFIV8MLWJB: WT
 JuiceBox    Domain Calling   Browse 
Human (hg38); Hi-C
 		 
HiC
4DNFIV8MLWJB.hic (6.77 GB)  
 mCool
 Cooler-Tree


PHi-C2 (polymer dynamics modeling)
 Supplements
[616] 4DNFIC8MIJN3.hic 
 4DNFIC8MIJN3: WT
 application/octet-stream 6.37 GB MD5: b758f68935d59bf7b6e7f5d74ec3da74
[617] 4DNFIV8MLWJB.hic 
 4DNFIV8MLWJB: WT
 application/octet-stream 6.77 GB MD5: 741e6257b621c430aa07b3b0c3b9b9a2