Information
Accession GMS-64-55 

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TitleHi-C on mouse cerebellar granule neurons
Submit date2025-02-10 10:47:54
Last update date2025-02-10 10:47:54
Contact Sung-Joon PARK
park AT hgc.jp
The University of Tokyo
Sharing
Total file size4.49 GB
Keywords Hi-C  4DN  contact matrix 
 Study
Experiment type in situ Hi-C
Summary 4DNFIASIXTZM
Assay Details: MboI
Dataset: Hi-C on mouse cerebellar granule neurons
Condition: 8 day old neurons - Tob2b KD
Notes: N/A
Biosource: cerebellar granule neuron - 8 days old
File Download URL: https://data.4dnucleome.org/files-processed/4DNFIASIXTZM/@@download/4DNFIASIXTZM.hic

4DNFIWWD6HB3
Assay Details: MboI
Dataset: Hi-C on mouse cerebellar granule neurons
Condition: 8 day old neurons - Tob2b KD
Notes: N/A
Biosource: cerebellar granule neuron - 8 days old
File Download URL: https://data.4dnucleome.org/files-processed/4DNFIWWD6HB3/@@download/4DNFIWWD6HB3.hic

Citation(s) 4DNESCDQ9OV3
 Experiment
OrganismMouse
Cell (Tissue) cerebellar granule neuron - 8 days old
Protocol 4DN_in_situ_Hi-C_protocol_20170729.pdf
Data processing HiC Processing Pipeline - v0.3.0
 Analysis
[630] 4DNFIASIXTZM: 8 day old neurons - Tob2b KD
 JuiceBox  Domain CallingBrowse  Browse (All)
Mouse (mm10); Hi-C

HiC

4DNFIASIXTZM.hic (2.35 GB)  
 Hi-C map is too sparse
 mCool
 Cooler-Tree
[631] 4DNFIWWD6HB3: 8 day old neurons - Tob2b KD
 JuiceBox  Domain CallingBrowse
Mouse (mm10); Hi-C

HiC

4DNFIWWD6HB3.hic (2.14 GB)  
 Hi-C map is too sparse
 mCool
 Cooler-Tree
 Supplements
[630] 4DNFIASIXTZM.hic
 4DNFIASIXTZM: 8 day old neurons - Tob2b KD
 application/octet-stream 2.35 GB MD5: 794d5f40618d26b6ccd19966e47dbbb5
[631] 4DNFIWWD6HB3.hic
 4DNFIWWD6HB3: 8 day old neurons - Tob2b KD
 application/octet-stream 2.14 GB MD5: a6b875de0c57503f8815729eb970357f