| Accession | GMS-64-57
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| Title | Hi-C on mouse cerebellar granule neurons |
| Submit date | 2025-02-10 10:49:28 |
| Last update date | 2025-02-10 10:49:28 |
| Contact | Sung-Joon PARK park AT hgc.jp The University of Tokyo |
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| Total file size | 6.30 GB |
| Keywords | Hi-C 4DN contact matrix |
| Experiment type | in situ Hi-C |
| Summary | 4DNFIOYBTKML Assay Details: MboI Dataset: Hi-C on mouse cerebellar granule neurons Condition: 8 day old neurons - Brd4 KD Notes: N/A Biosource: cerebellar granule neuron - 8 days old File Download URL: https://data.4dnucleome.org/files-processed/4DNFIOYBTKML/@@download/4DNFIOYBTKML.hic 4DNFI16SK65H Assay Details: MboI Dataset: Hi-C on mouse cerebellar granule neurons Condition: 8 day old neurons - Brd4 KD Notes: N/A Biosource: cerebellar granule neuron - 8 days old File Download URL: https://data.4dnucleome.org/files-processed/4DNFI16SK65H/@@download/4DNFI16SK65H.hic |
| Citation(s) | 4DNESMQOL4MV |
| Organism | Mouse |
| Cell (Tissue) | cerebellar granule neuron - 8 days old |
| Protocol | 4DN_in_situ_Hi-C_protocol_20170729.pdf |
| Data processing | HiC Processing Pipeline - v0.3.0 |
| [635] | 4DNFI16SK65H: 8 day old neurons - Brd4 KD JuiceBox Domain Calling Browse Browse (All) Mouse (mm10); Hi-C |
 HiC 4DNFI16SK65H.hic (2.99 GB) Hi-C map is too sparse mCool Cooler-Tree |
| [634] | 4DNFIOYBTKML: 8 day old neurons - Brd4 KD JuiceBox Domain Calling Browse Mouse (mm10); Hi-C |
HiC 4DNFIOYBTKML.hic (3.31 GB) Hi-C map is too sparse mCool Cooler-Tree |
