Information
Accession GMS-64-78 

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TitleHi-C on WTC-11 cardiac differention timecourse
Submit date2025-02-18 15:30:04
Last update date2025-02-18 15:30:04
Contact Sung-Joon PARK
park AT hgc.jp
The University of Tokyo
Sharing
Total file size4.84 GB
Keywords Hi-C  4DN  contact matrix 
 Study
Experiment type in situ Hi-C
Summary 4DNFIH6ANSX9
Assay Details: DdeI and DpnII
Dataset: Hi-C on WTC-11 cardiac differention timecourse
Condition: atrial - 20 days
Notes: N/A
Biosource: WTC-11 differentiated to cardiac muscle cell
File Download URL: https://data.4dnucleome.org/files-processed/4DNFIH6ANSX9/@@download/4DNFIH6ANSX9.hic

Citation(s) 4DNESR9IH796
 Experiment
OrganismHuman
Cell (Tissue) WTC-11 differentiated to cardiac muscle cell
Protocol 4DN_in_situ_Hi-C_protocol_20170729.pdf
Data processing HiC Processing Pipeline - v0.3.0
 Analysis
[668] 4DNFIH6ANSX9: atrial - 20 days
 JuiceBox  Domain CallingBrowse  Browse (All)
Human (hg38); Hi-C

HiC

4DNFIH6ANSX9.hic (4.84 GB)  
 mCool
 Cooler-Tree


PHi-C2 (polymer dynamics modeling)
















































failed 
[Domain] X:30700000-38200000 (300 bins,25Kb)
[Domain] X:101300000-103200000 (76 bins,25Kb)
[Domain] X:101375000-103300000 (77 bins,25Kb)
[Domain] X:111600000-118300000 (268 bins,25Kb)
[Domain] X:120700000-123500000 (112 bins,25Kb)
[Domain] X:140700000-142600000 (76 bins,25Kb)
[Domain] X:140750000-142650000 (76 bins,25Kb)
[Domain] X:142800000-147800000 (200 bins,25Kb)
[Domain] X:142825000-147825000 (200 bins,25Kb)
[Domain] X:154890000-155990000 (44 bins,25Kb)

 Supplements
[668] 4DNFIH6ANSX9.hic
 4DNFIH6ANSX9: atrial - 20 days
 application/octet-stream 4.84 GB MD5: ed887fc9cd757f1108178fa872805ee8