| Accession | GMS-65-11
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| Title | HCT116 with Crispr generated mClover and AID-tagged RAD21 |
| Submit date | 2025-01-12 17:53:11 |
| Last update date | 2025-01-12 17:53:11 |
| Contact | GMSuite GENOMEMODALITY gmsuite AT hgc.jp The University of Tokyo |
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| Total file size | 862.80 MB |
| Keywords | Hi-C 4DN contact matrix |
| Experiment type | in situ Hi-C |
| Summary | 4DNFI14QIC5Z Assay Details: MboI Dataset: Hi-C on RAD21-AID tagged HCT-116 Condition: RAD21-depleted and reintroduced for 60 min, no transcription Notes: N/A https://data.4dnucleome.org/files-processed/4DNFI14QIC5Z/@@download/4DNFI14QIC5Z.hic 4DNFI2LY7B73 Assay Details: MboI Dataset: Hi-C on RAD21-AID tagged HCT-116 Condition: RAD21-depleted and reintroduced for 60 min, no transcription Notes: N/A https://data.4dnucleome.org/files-processed/4DNFI2LY7B73/@@download/4DNFI2LY7B73.hic |
| Citation(s) | 4DNESS3E2ITC |
| Organism | Human |
| Cell (Tissue) | HCT116 |
| Protocol | 4DN_in_situ_Hi-C_protocol_20170729.pdf |
| Data processing | HiC Processing Pipeline - v0.3.0 |
| [1] | Hi-C on RAD21-AID tagged HCT-116 (4DNFI14QIC5Z) JuiceBox Domain Calling Browse Browse (All) Human (hg38); Hi-C |
 HiC 4DNFI14QIC5Z.hic (420.38 MB) Hi-C map is too sparse mCool Cooler-Tree |
| [2] | Hi-C on RAD21-AID tagged HCT-116 (4DNFI2LY7B73)  Human (hg38); Hi-C |
HiC 4DNFI2LY7B73.hic (442.42 MB) in processing... |
