| Accession | GMS-65-26
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| Title | Liquified Chromatin Hi-C on K562 cells |
| Submit date | 2025-01-16 11:58:39 |
| Last update date | 2025-01-16 11:58:39 |
| Contact | GMSuite GENOMEMODALITY gmsuite AT hgc.jp The University of Tokyo |
| Sharing | |
| Total file size | 7.22 GB |
| Keywords | Hi-C 4DN contact matrix |
| Experiment type | in situ Hi-C |
| Summary | 4DNFIWIYYNQ5 Assay Details: HindIII Dataset: Liquified Chromatin Hi-C on K562 cells Condition: Purified nuclei, pre-digestion with DpnII for 4 hours, digestion with HindIII Notes: N/A Biosource: K562 (Tier 2) File Download URL: https://data.4dnucleome.org/files-processed/4DNFIWIYYNQ5/@@download/4DNFIWIYYNQ5.hic |
| Citation(s) | 4DNESQICH2XW |
| Organism | Human |
| Cell (Tissue) | K562 |
| Protocol | 4DN_in_situ_Hi-C_protocol_20170729.pdf |
| Data processing | HiC Processing Pipeline - v0.3.0 |
| [472] | 4DNFIWIYYNQ5: Purified nuclei, pre-digestion with DpnII for 4 hours, digestion with HindIII JuiceBox Domain Calling Browse Browse (All) Human (hg38); Hi-C |
 HiC 4DNFIWIYYNQ5.hic (7.22 GB) Hi-C map is too sparse mCool Cooler-Tree |
