Information
Accession GMS-65-31 

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TitleHi-C on H1 cells - protocol variations
Submit date2025-01-16 18:22:24
Last update date2025-01-16 18:22:24
Contact GMSuite GENOMEMODALITY
gmsuite AT hgc.jp
The University of Tokyo
Sharing
Total file size2.70 GB
Keywords Hi-C  4DN  contact matrix 
 Study
Experiment type in situ Hi-C
Summary 4DNFIDJ2JZ7Q
Assay Details: HindIII
Dataset: Hi-C on H1 cells - protocol variations
Condition: Formaldehyde+DSG, HindIII
Notes: N/A
Biosource: H1-hESC
File Download URL: https://data.4dnucleome.org/files-processed/4DNFIDJ2JZ7Q/@@download/4DNFIDJ2JZ7Q.hic

Citation(s) 4DNES5WCKFXE
 Experiment
OrganismHuman
Cell (Tissue) H1-hESC
Protocol 4DN_in_situ_Hi-C_protocol_20170729.pdf
Data processing HiC Processing Pipeline - v0.3.0
 Analysis
[478] 4DNFIDJ2JZ7Q: Formaldehyde+DSG, HindIII
 JuiceBox  Domain CallingBrowse  Browse (All)
Human (hg38); Hi-C

HiC

4DNFIDJ2JZ7Q.hic (2.70 GB)  
 Hi-C map is too sparse
 mCool
 Cooler-Tree
 Supplements
[478] 4DNFIDJ2JZ7Q.hic
 4DNFIDJ2JZ7Q: Formaldehyde+DSG, HindIII
 application/octet-stream 2.70 GB MD5: bfe1c7daf6cca9e9824c42fbf24272e1