Information
Accession GMS-65-32 

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TitleHi-C on H1 cells - protocol variations
Submit date2025-01-16 21:04:54
Last update date2025-01-16 21:04:54
Contact GMSuite GENOMEMODALITY
gmsuite AT hgc.jp
The University of Tokyo
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Total file size2.05 GB
Keywords Hi-C  4DN  contact matrix 
 Study
Experiment type in situ Hi-C
Summary 4DNFIALNLR78
Assay Details: DpnII
Dataset: Hi-C on H1 cells - protocol variations
Condition: Formaldehyde+EGS, DpnII
Notes: N/A
Biosource: H1-hESC
File Download URL: https://data.4dnucleome.org/files-processed/4DNFIALNLR78/@@download/4DNFIALNLR78.hic

Citation(s) 4DNESLTRW5KE
 Experiment
OrganismHuman
Cell (Tissue) H1-hESC
Protocol 4DN_in_situ_Hi-C_protocol_20170729.pdf
Data processing HiC Processing Pipeline - v0.3.0
 Analysis
[479] 4DNFIALNLR78: Formaldehyde+EGS, DpnII
 JuiceBox  Domain CallingBrowse  Browse (All)
Human (hg38); Hi-C

HiC

4DNFIALNLR78.hic (2.05 GB)  
 Hi-C map is too sparse
 mCool
 Cooler-Tree
 Supplements
[479] 4DNFIALNLR78.hic
 4DNFIALNLR78: Formaldehyde+EGS, DpnII
 application/octet-stream 2.05 GB MD5: 214d6c307d5cb32b0d9d008f23801af8