| Accession | GMS-65-43
URL copied to the clipboard |
| Title | Hi-C on GM12878 cells - protocol variations |
| Submit date | 2025-01-17 10:05:38 |
| Last update date | 2025-01-17 10:05:38 |
| Contact | GMSuite GENOMEMODALITY gmsuite AT hgc.jp The University of Tokyo |
| Sharing | |
| Total file size | 1.74 GB |
| Keywords | Hi-C 4DN contact matrix |
| Experiment type | in situ Hi-C |
| Summary | 4DNFIZGCA8AH Assay Details: MboI Dataset: Hi-C on GM12878 cells - protocol variations Condition: in situ Hi-C on GM12878 with MboI and bio-dATP (in agar plugs) Notes: N/A Biosource: GM12878 File Download URL: https://data.4dnucleome.org/files-processed/4DNFIZGCA8AH/@@download/4DNFIZGCA8AH.hic |
| Citation(s) | 4DNESLLA3R1V |
| Organism | Human |
| Cell (Tissue) | GM12878 |
| Protocol | 4DN_in_situ_Hi-C_protocol_20170729.pdf |
| Data processing | HiC Processing Pipeline - v0.3.0 |
| [490] | 4DNFIZGCA8AH: in situ Hi-C on GM12878 with MboI and bio-dATP (in agar plugs) JuiceBox Domain Calling Browse Browse (All) Human (hg38); Hi-C |
 HiC 4DNFIZGCA8AH.hic (1.74 GB) Hi-C map is too sparse mCool Cooler-Tree |
