| Accession | GMS-65-44
URL copied to the clipboard |
| Title | Hi-C on GM12878 cells - protocol variations |
| Submit date | 2025-01-17 10:05:40 |
| Last update date | 2025-01-17 10:05:40 |
| Contact | GMSuite GENOMEMODALITY gmsuite AT hgc.jp The University of Tokyo |
| Sharing | |
| Total file size | 2.60 GB |
| Keywords | Hi-C 4DN contact matrix |
| Experiment type | in situ Hi-C |
| Summary | 4DNFIOCW5AEM Assay Details: MboI Dataset: Hi-C on GM12878 cells - protocol variations Condition: in situ Hi-C on GM12878 with MboI and bio-dATP (Tethered HiC, high ligation volume) Notes: N/A Biosource: GM12878 File Download URL: https://data.4dnucleome.org/files-processed/4DNFIOCW5AEM/@@download/4DNFIOCW5AEM.hic |
| Citation(s) | 4DNESLQG7ZKJ |
| Organism | Human |
| Cell (Tissue) | GM12878 |
| Protocol | 4DN_in_situ_Hi-C_protocol_20170729.pdf |
| Data processing | HiC Processing Pipeline - v0.3.0 |
| [491] | 4DNFIOCW5AEM: in situ Hi-C on GM12878 with MboI and bio-dATP (Tethered HiC, high ligation volume) JuiceBox Domain Calling Browse Browse (All) Human (hg38); Hi-C |
 HiC 4DNFIOCW5AEM.hic (2.60 GB) Hi-C map is too sparse mCool Cooler-Tree |
