| Accession | GMS-65-49
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| Title | Hi-C on GM12878 cells - protocol variations |
| Submit date | 2025-01-17 10:06:56 |
| Last update date | 2025-01-17 10:06:56 |
| Contact | GMSuite GENOMEMODALITY gmsuite AT hgc.jp The University of Tokyo |
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| Total file size | 1.60 GB |
| Keywords | Hi-C 4DN contact matrix |
| Experiment type | in situ Hi-C |
| Summary | 4DNFIX4PJKXZ Assay Details: MboI Dataset: Hi-C on GM12878 cells - protocol variations Condition: in situ Hi-C on GM12878 with MboI and bio-dATP (pellet and supernatant protocol) Notes: N/A Biosource: GM12878 File Download URL: https://data.4dnucleome.org/files-processed/4DNFIX4PJKXZ/@@download/4DNFIX4PJKXZ.hic |
| Citation(s) | 4DNESPXW8XHY |
| Organism | Human |
| Cell (Tissue) | GM12878 |
| Protocol | 4DN_in_situ_Hi-C_protocol_20170729.pdf |
| Data processing | HiC Processing Pipeline - v0.3.0 |
| [496] | 4DNFIX4PJKXZ: in situ Hi-C on GM12878 with MboI and bio-dATP (pellet and supernatant protocol) JuiceBox Domain Calling Browse Browse (All) Human (hg38); Hi-C |
 HiC 4DNFIX4PJKXZ.hic (1.60 GB) Hi-C map is too sparse mCool Cooler-Tree |
