Information
Accession GMS-65-64 

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TitleHi-C on HeLa cells - protocol variations
Submit date2025-01-17 20:54:56
Last update date2025-01-17 20:54:56
Contact GMSuite GENOMEMODALITY
gmsuite AT hgc.jp
The University of Tokyo
Sharing
Total file size1.58 GB
Keywords Hi-C  4DN  contact matrix 
 Study
Experiment type in situ Hi-C
Summary 4DNFI7H4II2V
Assay Details: HindIII
Dataset: Hi-C on HeLa cells - protocol variations
Condition: Formaldehyde+DSG, HindIII, non synchronized
Notes: N/A
Biosource: HeLa-S3
File Download URL: https://data.4dnucleome.org/files-processed/4DNFI7H4II2V/@@download/4DNFI7H4II2V.hic

Citation(s) 4DNES61ZK6S8
 Experiment
OrganismHuman
Cell (Tissue) HeLa-S3
Protocol 4DN_in_situ_Hi-C_protocol_20170729.pdf
Data processing HiC Processing Pipeline - v0.3.0
 Analysis
[516] 4DNFI7H4II2V: Formaldehyde+DSG, HindIII, non synchronized
 JuiceBox  Domain CallingBrowse  Browse (All)
Human (hg38); Hi-C

HiC

4DNFI7H4II2V.hic (1.58 GB)  
 Hi-C map is too sparse
 mCool
 Cooler-Tree
 Supplements
[516] 4DNFI7H4II2V.hic
 4DNFI7H4II2V: Formaldehyde+DSG, HindIII, non synchronized
 application/octet-stream 1.58 GB MD5: ce6469ce35c41d5fbf4cbb8c99e5c7e3