| Accession | GMS-65-70
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| Title | Hi-C on HeLa cells - protocol variations |
| Submit date | 2025-01-17 20:58:20 |
| Last update date | 2025-01-17 20:58:20 |
| Contact | GMSuite GENOMEMODALITY gmsuite AT hgc.jp The University of Tokyo |
| Sharing | |
| Total file size | 1.63 GB |
| Keywords | Hi-C 4DN contact matrix |
| Experiment type | in situ Hi-C |
| Summary | 4DNFIOUSETUP Assay Details: DpnII Dataset: Hi-C on HeLa cells - protocol variations Condition: Formaldehyde+EGS, DpnII, G1 phase Notes: N/A Biosource: HeLa-S3 File Download URL: https://data.4dnucleome.org/files-processed/4DNFIOUSETUP/@@download/4DNFIOUSETUP.hic |
| Citation(s) | 4DNESAOMA6X5 |
| Organism | Human |
| Cell (Tissue) | HeLa-S3 |
| Protocol | 4DN_in_situ_Hi-C_protocol_20170729.pdf |
| Data processing | HiC Processing Pipeline - v0.3.0 |
| [522] | 4DNFIOUSETUP: Formaldehyde+EGS, DpnII, G1 phase JuiceBox Domain Calling Browse Browse (All) Human (hg38); Hi-C |
 HiC 4DNFIOUSETUP.hic (1.63 GB) Hi-C map is too sparse mCool Cooler-Tree |
