Information
Accession GMS-65-77 

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TitleHi-C on HeLa cells - protocol variations
Submit date2025-01-18 01:28:54
Last update date2025-01-18 01:28:54
Contact GMSuite GENOMEMODALITY
gmsuite AT hgc.jp
The University of Tokyo
Sharing
Total file size1.73 GB
Keywords Hi-C  4DN  contact matrix 
 Study
Experiment type in situ Hi-C
Summary 4DNFIBXWIH8J
Assay Details: HindIII
Dataset: Hi-C on HeLa cells - protocol variations
Condition: Formaldehyde, HindIII, mitosis
Notes: N/A
Biosource: HeLa-S3
File Download URL: https://data.4dnucleome.org/files-processed/4DNFIBXWIH8J/@@download/4DNFIBXWIH8J.hic

Citation(s) 4DNESEDV9YMX
 Experiment
OrganismHuman
Cell (Tissue) HeLa-S3
Protocol 4DN_in_situ_Hi-C_protocol_20170729.pdf
Data processing HiC Processing Pipeline - v0.3.0
 Analysis
[529] 4DNFIBXWIH8J: Formaldehyde, HindIII, mitosis
 JuiceBox  Domain CallingBrowse  Browse (All)
Human (hg38); Hi-C

HiC

4DNFIBXWIH8J.hic (1.73 GB)  
 Hi-C map is too sparse
 mCool
 Cooler-Tree
 Supplements
[529] 4DNFIBXWIH8J.hic
 4DNFIBXWIH8J: Formaldehyde, HindIII, mitosis
 application/octet-stream 1.73 GB MD5: 8c93a5e6dbe244bfad25e7fddbaed54b