Accession | GMS-65-1
URL copied to the clipboard |
Submit date | 2022-01-31 12:21:48 |
Last update date | 2023-01-11 15:55:23 |
Contact | GMSuite GENOMEMODALITY gmsuite AT hgc.jp The University of Tokyo |
Sharing | |
Total file size | 4.32 GB |
Keywords | Chromatin PHi-C Hi-C |
Experiment type | Hi-C experiment with mouse ESCs.PHi-C structure modeling. |
Summary | Public datasets were used. |
Citation(s) |
Organism | Mouse |
Cell (Tissue) | mESCs |
Protocol | |
Data processing | HiCExplorer — HiCExplorer 3.7.2 documentation |
[1] |
H1 cell line (SRR2977621) Browse (All Tracks) H1_human_RNA.bam (429.08 MB) Human (hg38); RNA-Seq |
![]() BAM |
[2] |
Transcriptome at E16.5 Browse (All Tracks) E16.5_Rep1.bam (558.05 MB) Mouse (mm10); RNA-Seq |
![]() BAM |
[3] |
Mouse ESC RNA-seq (GSM4647545) Browse ESC1_RNA.bam (1.65 GB) Mouse (mm10); RNA-Seq |
![]() BAM |
[4] |
Intra-chromosomal Hi-C contacts (mESC Rep1) Browse mESC1.intra.hic (1.69 GB) Mouse (mm10); Hi-C |
![]() HiC mCool Cooler-Tree
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