Keyword >> Disease
| Accession | File (50) | Cell/Tissue | Keywords |
|---|---|---|---|
|
GMS-64-2 Generation of 3D Lacrimal Gland Organoids from Human Pluripotent Stem Cells |
169
Cell populations (Day 10) D10_Cls0_1_10.png (527.26 KB) 2022-01-31 17:15:48 168 LG-like organoid LacrimalGland.webm (815.73 KB) 2022-01-31 13:43:30 |
Larcrimal gland | Organoid Disease Sjogren's syndrome |
|
GMS-64-4 Transcriptome and Histones in Naive B Cell |
334
JBrowse
H3K27ac H3K27ac.bigwig (3.14 MB) 2023-02-05 16:10:46 hg38 ChIP-Seq 332 JBrowse H3K4me3 H3K4me3.bigwig (1.19 MB) 2023-02-05 15:52:06 hg38 ChIP-Seq 330 JBrowse H3K9me3 H3K9me3.bigwig (3.01 MB) 2023-02-05 15:52:05 hg38 ChIP-Seq 329 JBrowse H3K27me3 H3K27me3.bigwig (2.68 MB) 2023-02-05 15:52:03 hg38 ChIP-Seq 328 JBrowse H3K4me1 H3K4me1.bigwig (2.57 MB) 2023-02-05 15:52:02 hg38 ChIP-Seq 327 JBrowse H3K36me3 H3K36me3.bigwig (1.24 MB) 2023-02-05 15:51:59 hg38 ChIP-Seq 323 JBrowse Transcriptome (NB Rep2) NB_2_RNA.cram (5.48 GB) 2023-01-31 17:44:50 hg38 RNA-Seq 322 JBrowse Transcriptome (NB Rep1) NB_1_RNA.cram (3.14 GB) 2023-01-31 17:36:37 hg38 RNA-Seq |
Naive B cell | Disease Lymphoma |
|
GMS-64-6 HiC Contacts in NB and GCB |
341
JBrowse
NB_PromoLRC_0.01 PromoLRC_NB_0.01.bigbed (271.60 KB) 2023-02-05 16:14:10 hg38 Hi-C 342 JBrowse GCB_PromoLRC_0.01 PromoLRC_GCB_0.01.bigbed (180.79 KB) 2023-02-05 16:14:12 hg38 Hi-C 343 JBrowse Promoter-LRC at NB (All) PromoLRC_NB.bed.gz (961.82 KB) 2023-02-06 09:25:20 hg38 Hi-C 344 JBrowse Promoter-LRC at GCB (All) PromoLRC_GCB.bed.gz (758.38 KB) 2023-02-06 09:25:20 hg38 Hi-C |
B cell | Disease Lymphoma |
|
GMS-64-84 Single-cell transcriptome of hiPSC-derived lacrimal gland organoids |
793
CellBrowse
hiPSCs differentiating into lacrimal gland-like organoids (Day 0) LG62-day0_SR3_4.RData (395.91 MB) 2025-04-22 16:52:24 hg38 sc(n)RNA-Seq 792 CellBrowse hiPSCs differentiating into lacrimal gland-like organoids (Day 20) LG62-day20_SR3_4.RData (203.97 MB) 2025-04-22 16:51:42 hg38 sc(n)RNA-Seq 787 CellBrowse hiPSCs differentiating into lacrimal gland-like organoids (Day 10) LG_d10Seurat5.rds (204.33 MB) 2025-04-20 11:25:23 hg38 sc(n)RNA-Seq 786 CellBrowse hiPSCs differentiating into lacrimal gland-like organoids (Day 0,10,20) S3_LG.RData (1.77 GB) 2025-04-19 18:34:00 hg38 sc(n)RNA-Seq |
iPSC | Nuclear-scale Single cell Sjogren's syndrome Disease |
|
GMS-65-112 A common molecular mechanism underlying Cornelia de Lange and CHOPS syndromes |
744
JBrowse
RAD21 in NIPBL-mutated cells GSM8529573_RAD21_ChIP_NIPBLmut.100.bigwig (151.69 MB) 2025-04-01 18:26:35 hg38 ChIP-Seq 754 JBrowse AFF4 in wild-type cells GSM8529582_AFF4_ChIP_FT_control.100.bigwig (157.90 MB) 2025-04-02 12:23:14 hg38 ChIP-Seq 753 JBrowse NELFC in NIPBL-mutated cells GSM8529585_NELFC_ChIP_NIPBLmut.100.bigwig (149.35 MB) 2025-04-02 11:45:33 hg38 ChIP-Seq 752 JBrowse NELFC in wild-type cells GSM8529584_NELFC_ChIP_FT_control.100.bigwig (153.47 MB) 2025-04-02 11:44:51 hg38 ChIP-Seq 751 JBrowse H3K27ac in NIPBL-mutated cells GSM8529579_H3K27ac_ChIP_NIPBLmut.100.bigwig (135.98 MB) 2025-04-02 10:46:55 hg38 ChIP-Seq 750 JBrowse H3K27ac in wild-type cells GSM8529578_H3K27ac_ChIP_FT_control.100.bigwig (137.23 MB) 2025-04-02 10:46:38 hg38 ChIP-Seq 749 JBrowse BRD4 in NIPBL-mutated cells GSM8529577_BRD4_ChIP_NIPBLmut.100.bigwig (148.86 MB) 2025-04-02 10:10:34 hg38 ChIP-Seq 748 JBrowse BRD4 in wild-type cells GSM8529576_BRD4_ChIP_FT_control.100.bigwig (149.17 MB) 2025-04-02 10:10:13 hg38 ChIP-Seq 747 JBrowse NIPBL in NIPBL-mutated cells GSM8529575_NIPBL_ChIP_NIPBLmut.100.bigwig (153.26 MB) 2025-04-02 10:09:29 hg38 ChIP-Seq 746 JBrowse NIPBL in wild-type cells GSM8529574_NIPBL_ChIP_FT_control.100.bigwig (153.77 MB) 2025-04-02 10:09:05 hg38 ChIP-Seq 745 JBrowse RAD21 in wild-type cells GSM8529572_RAD21_ChIP_FT_control.100.bigwig (151.95 MB) 2025-04-01 18:31:09 hg38 ChIP-Seq 755 JBrowse AFF4 in NIPBL-mutated cells GSM8529583_AFF4_ChIP_NIPBLmut.100.bigwig (154.75 MB) 2025-04-02 12:23:42 hg38 ChIP-Seq 756 JBrowse Input in wild-type cells (replicate 1) GSM8529580_input_1_FT_control.100.bigwig (153.15 MB) 2025-04-02 12:38:37 hg38 ChIP-Seq 757 JBrowse Input in NIPBL-mutated cells (replicate 1) GSM8529581_input_1_NIPBLmut.100.bigwig (148.66 MB) 2025-04-02 12:39:05 hg38 ChIP-Seq 758 JBrowse Input in wild-type cells (replicate 2) GSM8529586_input_2_FT_control.100.bigwig (150.44 MB) 2025-04-02 12:40:35 hg38 ChIP-Seq 759 JBrowse Input in NIPBL-mutated cells (replicate 2) GSM8529587_input_2_NIPBLmut.100.bigwig (148.85 MB) 2025-04-02 12:41:28 hg38 ChIP-Seq 760 Graphical Abstract GraphicalAbstract.png (303.18 KB) 2025-04-02 15:14:23 |
293FT | Disease CHOPS CdLS Nuclear-scale AFF4 NELFC RAD21 NIPBL BRD4 Genome DNA |
|
GMS-65-2 Degradation of RAD21 in HCT-116 |
346
human cohesin subunit STAG1 in complex with RAD21 peptide 6RRC.png (237.36 KB) 2023-05-29 14:25:36 353 JBrowse CBP narrow peaks (control) CBP_np1_peaks.narrowPeak.scaled.bigwig (2.90 MB) 2023-05-29 15:47:45 hg38 ChIP-Seq 350 JBrowse BRD4 narrow peaks (control) BRD4_np1_peaks.narrowPeak.scaled.bigwig (3.30 MB) 2023-05-29 14:53:19 hg38 ChIP-Seq 347 JBrowse AFF4 narrow peaks (control) AFF4_np1_peaks.narrowPeak.scaled.bigwig (992.08 KB) 2023-05-29 14:37:38 hg38 ChIP-Seq 367 JBrowse NELFCD narrow peaks (control) NELFCD_np1_peaks.narrowPeak.scaled.bigwig (2.35 MB) 2023-05-29 16:57:08 hg38 ChIP-Seq 389 JBrowse EU-seq (control, Rep1) accepted_hits.bam.sorted.bam (1.87 GB) 2023-05-29 18:12:53 hg38 RNA-Seq 386 JBrowse H3K4me1 narrow peaks (control) H3K4me1_np1_peaks.narrowPeak.scaled.bigwig (7.56 MB) 2023-05-29 17:59:08 hg38 ChIP-Seq 385 JBrowse H3K27ac narrow peaks (control) H3K27ac_np1_peaks.narrowPeak.scaled.bigwig (5.42 MB) 2023-05-29 17:59:08 hg38 ChIP-Seq 374 JBrowse RAD21 narrow peaks (control) RAD21_np1_peaks.narrowPeak.scaled.bigwig (6.32 MB) 2023-05-29 16:57:08 hg38 ChIP-Seq 373 JBrowse P300 narrow peaks (control) P300_np1_peaks.narrowPeak.scaled.bigwig (2.63 MB) 2023-05-29 16:57:08 hg38 ChIP-Seq 372 JBrowse MED1 narrow peaks (control, rep1) MED1_np1_peaks.narrowPeak.scaled.bigwig (1.68 MB) 2023-05-29 16:57:08 hg38 ChIP-Seq 371 JBrowse MAU2 narrow peaks (control) MAU2_np1_peaks.narrowPeak.scaled.bigwig (3.23 MB) 2023-05-29 16:57:08 hg38 ChIP-Seq 370 JBrowse NCBP1 narrow peaks (control) NCBP1_np1_peaks.narrowPeak.scaled.bigwig (1.81 MB) 2023-05-29 16:57:08 hg38 ChIP-Seq 369 JBrowse MED1 narrow peaks (control, rep2) MED1_np2_peaks.narrowPeak.scaled.bigwig (2.66 MB) 2023-05-29 16:57:08 hg38 ChIP-Seq 368 JBrowse CDK9 narrow peaks (control) CDK9_np1_peaks.narrowPeak.scaled.bigwig (1.94 MB) 2023-05-29 16:57:08 hg38 ChIP-Seq |
HCT116 | Cohesin Micro-C Disease CdLS Nuclear-scale AFF4 BRD4 MAU2 RAD21 Genome DNA |
